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FASTX-Toolkit : Short-Reads FASTA/FASTQ files preprocessing

FASTX-Toolkit provides various tools for file conversion from FASTA AND FASTQ files.Since various NGS tools need the specific file format as a part of the assembly and mapping commands.

The toolkit provides the following commands;

These commands have saved the efforts to write a code for converting file formats .So you can try these commands to process your data depending on your purpose.

URL to download  choose your operating system and extract the archive and use terminal to execute the commands with proper command line arguments.

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